Instructions for Viewing Solid State Structures with CHIME
This presentation requires that you have downloaded
and installed MDL's free CHIME software, which in turn requires one
of the following browsers.
- Macintosh: you must use Netscape Communicator vs. 4 (4.0,
4.7x or 4.8x). These are old versions (mainly lacking some of the security
features of newer version), but they are the only versions that work well
with CHIME (they also work fine with other plug-ins such as Flash and Shockwave).
Version 4.8 is still avaiable for download if you look around on the internet.
- Windows: use Microsoft Internet Explorer 4.01 or later
If you meet these software requirements, click below to
Proceed
to view presentation
Some comments
- Effective viewing or projection of this presentation requires
that you use the mouse to rotate and zoom each view.
- CHIME offers a plug-in menu with lots of interesting options
(feel free to explore! In particular, try out "Select>Mouse
Picking Action>Distances" and then click on two atoms in
succession to see the distance between them--the distance should
show up at the bottom information bar of your browser window). To
get the pop-up menu
- On a Mac, click and hold down the mouse button in the
window showing the structure. (You must do this without moving
the mouse; if you move it while clicking, the structure will
rotate, but you won't see the pop-up menu.)
- Using Windows, use the right mouse button to get the pop-up
menu and the left mouse button to rotate.
- Here is a review of how to use the
mouse with Chime. You may wish to print this for handy
reference.
- After you start the presentation, you will not load the
molecular coordinates until you select a topic and press the gray
square button labelled "<-start by clicking here".
- At the bottom of each page is a "utilities" link. This
provides tools for measuring distances and angles within the
structure shown. This is an alternative to using the pop-up menu
described above.
- The "color scheme" link is designed for viewing protein
structures, so will not be useful for viewing these solid state
inorganic structures.
These pages were developed using Rasmol (Macintosh vs. 2.6) and web page templates,
both available from Eric
Martz's Rasmol and CHIME web site at the University of Massachusetts. I developed
and tested them on Power Macintosh computers (older 7600 and newer iMac) running
Netscape Navigator 4.70 with CHIME 2.0a plugin. Please let
me know if you have incompatability problems on the system you are using.
- Rob Scarrow, Haverford College, November 1999. (updated Fall 2003)